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Genome annotations of <i>Bipolaris</i> and related Pleosporaceae species for comparative genomics.

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Figshare2025-07-14 更新2026-04-08 收录
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This dataset provides comprehensive genome annotation data for multiple strains of <i>Bipolaris</i> species and other related fungi within the Pleosporaceae family. The annotated genomes include strains of <i>Bipolaris oryzae</i> (syn. <i>Cochliobolus miyabeanus</i>), along with additional <i>Bipolaris</i> species and representative taxa from Pleosporaceae, which are known for their roles as plant pathogens and producers of diverse secondary metabolites.Annotations were generated using the BRAKER3 pipeline with proteome-guided gene prediction, and were functionally characterized through OmicsBox. For each strain, the dataset includes:Genome files for <i>B. oryzae</i> isolated from South Korea (genome_files)GFF3 files with structural gene annotations (gff_files)FASTA files of predicted coding sequences (CDS) and proteins (cds_files and faa_files)Functional annotation table for<i> B. oryzae</i> F1253 This resource supports comparative genomic analyses, studies on fungal pathogenicity, host adaptation, and evolution across the Pleosporaceae lineage. The included strains were isolated from various plant hosts and geographic regions, enabling broad-scale phylogenetic and functional investigations.

提供机构:
Kim, Ki-Tae
创建时间:
2025-07-14
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