We see the percentage of false positive using various methods. Experiments: unit-mean; quantile; MACS peak finder; ChIPDiff; Rank normalization; two-stage unit-mean; ChIPnorm. The thresholds used are
Crossing routes for straight-small and straight-large and cluster-farther first routes for cluster were excluded from these tests. *: p <0.05; **: p <0.01; ***: p<0.001. Results of chi-square goodness