Genotype likelihoods for low-coverage whole-genome sequencing data of yellow warblers

The following datasets include the required input files used to
empirically test population assignment in WGSassign on Yellow Warbler
data. The file "yewa.known.ind105.ds_2x.beagle.gz" includes the
filtered variants of 105 Yellow Warbler individuals output as
genotype likelihoods and stored in a Beagle-formatted file. The
ID file, "yewa.known.ind105.reference.IDs.txt", is a
tab-delimited file with 2 columns, the first being the sample ID, and the
second being the known reference population. The sample order in the ID
file should match that of the input beagle file. To measure the assignment
accuracy of WGSassign, we used leave-one-out cross validation using the
input beagle file and our ID file.