Logistic regression results for sub-GRS and SLE GRS, for subphenotypes with sub-GRS p<0.1 in replication set (study 2).

All adjusted for 4 principal components. Adjusted for disease duration except early diagnosis; missing disease duration are dropped for discovery but imputed from source, age at diagnosis, and sex for other analyses. Combined studies have study as additional covariate.†std = standardized to normal distribution, CI = 95% confidence interval.