five

human-vaginal-v1-0 reference for LocalHGT

收藏
NIAID Data Ecosystem2026-05-01 收录
下载链接:
https://zenodo.org/record/10952064
下载链接
链接失效反馈
官方服务:
资源简介:
Please download the file human-vaginal-v1-0.fasta.gz and unzip it by "gzip -d human-vaginal-v1-0.fasta.gz".  After that, pass the full path of the file "human-vaginal-v1-0.fasta" to LocalHGT by "localhgt bkp -r /path-to/human-vaginal-v1-0.fasta" or  "localhgt event -r /path-to/human-vaginal-v1-0.fasta". "human-vaginal-v1-0.fasta.fai" is the index file, you can download it or not. If you download it, you should put it in the same folder as human-vaginal-v1-0.fasta. If you don't download it, LocalHGT will generate it automatically. The file genomes-all_metadata.tsv records the taxonomy information of each genome. If you want to analyze HGTs in human oral microbiome, you can use this reference. Detailed instructions can be seen at LocalHGT.
创建时间:
2024-04-14
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作