Determination of ErfA regulon by DAP-seq in several Pseudomonas species

ErfA is a transcription factor of Pseudomonas aeruginosa. We here define the genome-wide binding sites of ErfA by DAP-seq in Pseudomonas aeruginosa PAO1 and IHMA87, Pseudomonas chlororaphis PA23, Pseudomonas protegens CHA0 and Pseudomonas putida KT2440. DAP-seq analysis of His-tagged purified ErfA protein binding to sheared genomic DNA of Pseudomonas aeruginosa PAO1 and IHMA87, Pseudomonas chlororaphis PA23, Pseudomonas protegens CHA0 and Pseudomonas putida KT2440. DAP-seq was performed with ErfA protein from P. aeruginosa or P. chlororaphis. Samples with P. chloroaphis ErfA include "chlo" in the sample title.