aAdditive effect is computed as [(mean expression in DD homozygote)?(mean expression in BB homozygote)]/2 on a log2 scale. Positive value means D high expression, and negative value means B high expre
The goal of this project is to analyze allele-specific gene expression in ES cells established and maintained under LowGiL conditions without CHIR99021, which induces DNA hypomethylation.Based on this
We chose 27 predicted SNPs to test with Sanger sequencing. These were chosen from the Bubbleparse ranked list according to four sets of criteria, with all SNPs placed within the top 22,000 of the 68,0
List of candidate probesets previously validated in Kwan et al (2008) by qualitative or quantitative RT–PCR. The gene name and the significant probeset are indicated along with the SNP in LCLs and P-v