qfomam_pdf_data.tar.gz

This archive contains all the pdf files generated as results - with tree and alignment for each of the orthogroups where canonicals were confirmed or changes were proposed - for the <b>'ortho2tree'</b> analysis described in the manuscript <i>"Improved selection of canonical proteins for reference proteomes"</i> of eight QfO (Quest for Orthologs) mammal proteomes, based on UniProtKB data (release UP2022_05).A web interface for filtering and viewing the pdf files with the trees from the result of that analysis (and subsequent ones) is available at fasta.bioch.virginia.edu/ortho2treeCode and instructions for running the analysis on this data are available at: https://github.com/g-insana/ortho2tree<br><br>