Additional file 2: of The impact of RNA sequence library construction protocols on transcriptomic profiling of leukemia

Table S1. Biodetection analysis table generated using NOISeq package. Table S2. The list of genes showing differential expression in RD and PA methods based on clustering of overall gene expression data. Table S3. The list of genes and drugs used for ROC analysis. Table S4. Phi-correlation-variant calling. Table S5. GATK RNA-seq variant calling and variant annotation pipeline statistics. Table S6. Recurrent mutations identified by GATK. Table S7. Pathway analysis. Table S8. The sequences for primers used in qRT-PCR and fusion gene PCR amplification experiments. Table S9. PCR and Sanger sequencing details for fusion gene validation. (XLS 208 kb)