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Data 2. 18srRNA Species Tree Newick

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Figshare2025-03-18 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Data_2_18srRNA_Species_Tree_Newick/28613012/1
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资源简介:
Phylogenetic species tree. Members of <i>Fabacea </i>(Blue) and <i>Brassicacea </i>(Red), <i>Marchantiaceae </i>(Gray, outgroup). Species are further grouped into Fungal-Associated (Green) and Non-Mycorrhizal (Purple). Based on 18s Small Subunit Ribosomal  RNA sequences obtained through keyword search on GenBank and NCBI blastn in species’ genomes. Sequences aligned using MUSCLE through AliView, trimmed to shortest contiguous length, and exported in FASTA format to RAxML-ng. Tree constructed using GTR+G model seed 54321, <i>M.polymorpha</i> manually selected as outgroup.
提供机构:
Vuong, Tiffany; Hanson, Harrah; Eno, Aiden
创建时间:
2025-03-18
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