Supplement 1. Scripts and multi-colony Atlantic Puffin data for running the mixed model for survival at the multi-population scale.

File List
marrayp1_Fair.dat  - M-arrays for the first trap-dependence age class in Fair
Isle

marrayp1_May.dat 
- M-arrays for the first trap-dependence age class in
Isle of May

marrayp1_Rost.dat 
- M-arrays for the first trap-dependence age class in
Røst

marrayp1_Skomer.dat  - M-arrays for the first trap-dependence age class in Skomer

marrayp2_Fair.dat 
- M-arrays for the second trap-dependence age class
in Fair Isle

marrayp2_May.dat 
- M-arrays for the second trap-dependence age class
in Isle of May

marrayp2_Rost.dat  - M-arrays for the second trap-dependence age class
in Røst

marrayp2_Skomer.dat  - M-arrays for the second trap-dependence age class in Skomer

SST.dat 
- covariate values = sea surface temperature in the
vicinity of the breeding colonies

multipoppuffins.R 
- R script which reads in the data and calls WinBUGS

multipoppuffins.bug  - The
WinBUGS script which runs the model with sea surface
temperature (SST) as a covariate and both global- and local-scale variances

multipoppuffins.zip  -
All files at once

Description
All the .dat files are text files containing the data, in the form of M-arrays, described and analyzed in the original paper; multipoppuffins.R and multipoppuffins.bug are the scripts with which the model described in the original paper and in Appendix A can be built and fitted to these data.