Capturing Dynamic Outcomes with PDX Model/Mutation Load in PDAC
收藏NIAID Data Ecosystem2026-05-26 收录
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资源简介：
pancreatic ductal adenocarcinoma DNA/RNA sequence data
应用场景：
创建时间：
2018-08-21
相关数据集
Long-read nanopore sequencing of a pancreatic cancer cell culture derived from a KPC mouse.
Long-read sequencing libraries were prepared using the Oxford Nanopore LSK109 kit (ONT, Oxford, UK). 400 ng of library was loaded on a promethION flowcell and run for 72h on a promethION beta sequence
NIAID Data Ecosystem60
Most frequently (>70%) detected regions of gain, loss and LOH in PDAC genotyped on the Affymetrix 500 K SNP array platform (n = 20).
*Only cancer-associated genes (in bold) or genes related to pancreas (underlined) are shown.
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Supplementary Table S1 from A Phase III Randomized Trial of Integrated Genomics and Avatar Models for Personalized Treatment of Pancreatic Cancer: The AVATAR Trial
Supplementary Table 1. Custom virtual gene panel included in the whole exome sequencing analysis
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Additional file 5: of Tumor mutational burden quantification from targeted gene panels: major advancements and challenges
Table S5. Empirical analysis of TMB association or predictive value for immunotherapy response. These analyses were performed on panel-based TMB values, directly calculated by panel sequencing. The ta
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Additional file 5 of Exploring the prognostic function of TMB-related prognostic signature in patients with colon cancer
Supplementary Material 5
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