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SKn7 ChIP Raw sequence reads

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NIAID Data Ecosystem2026-05-02 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP559341
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In order to elucidate which genes are regulated by Skn7 during fungal interactions, we conducted ChIP experiments combined with DNA fragments. The peak intensity map derived from the ChIP-seq data revealed a significant enrichment of Skn7 binding to specific promoter regions of C. cinerea when cocultured with Gongronella sp. w5. According to the MEME analysis of 1-kb upstream regions of Skn7-targeted genes, three motifs, including TGYYCAA, NWGAANN , and TCGAVRW were identified . Transcript profiling and ChIP seq analysis revealed that Skn7 is directly bound to the promoters of some intracellular antioxidative enzyme genes and lcc9, serving as a defense strategy in C. cinerea during the confrontation.
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2025-07-14
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