Additional file 12: of A comparison of heat-stress transcriptome changes between wild-type Arabidopsis pollen and a heat-sensitive mutant harboring a knockout of cyclic nucleotide-gated cation channel 16 (cngc16)

230 Genes with putative Ca2+-signaling related functions. 230 genes with putative Ca2+-signaling related functions were identified here with quantifiable expression levels in the pollen RNA-Seq data set. Of those 230, 40 genes (yellow highlights) showed HS-dependent changes (≥ 2-fold changes with adjusted p-value ≤0.01) in WT pollen. Similar HS-dependent changes were also observed for cngc16 mutant, with seven potential exceptions with lower degrees of significance shown in bold. a Ratio of expression between pollen and seedling is based on Loraine et al. 2013 (PMCID: PMC3668042 [22]). b A comparison is provided to HS-dependent changes observed for aerial parts of seedlings exposed to a one hour 38 °C HS based on publicly available microarray data in AtGenExpress, ( http://jsp.weigelworld.org/expviz/expviz.jsp ; Schmid et al. 2005 (PMID: 15806101 [33]). The log2-fold change was calculated based on means of normalized values for two heat-stressed seedlings compared to two non-stressed seedlings. (XLSX 15 kb)