ANI, AAI and dDDH analysis of A. apicola vs other Arsenophonus strains

Average Nucleotide Identity (ANI), Average Amino acid identity (AAI) and Digital DNA-DNA Hybridization (dDDH) data for Arsenophonus apicola compared to other sequenced strains within the clade Arsenophonus, and with Providencia stuartii and Proteus mirabilis as outgroup genera. Sheet 1: Pairwise ANI between strains. Sheet 2: Pairwise AAI between strains. Sheet 3: dDDH of A. apicola vs other strains using three calculation methods. ANI and AAI Calculations were made using the enveomics toolkit (Rodriguez-R LM, Konstantinidis KT. The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes. PeerJ Preprints. 2016;4:e1900v1.). dDDH calculations were completed using the Genome-to-Genome Distance Calculator GGDC 3.0 from dsmz (https://www.dsmz.de/services/online-tools/genome-to-genome-distance-calculator-ggdc).