HistoBreastCAD System

models and code to test inference like in HistoBreastCAD. The data used to train was the BACH dataset. command for use: python wsi_heatmap_inference.py \ --wsi_path ./data/images/A03.svs \ --seg_ckpt ./modelos/best_deeplabv3plus.pth \ --cls_ckpts ./modelos/best_resnet18.pt,./modelos/best_efficientnet.pt \ --backbones resnet18,efficientnet_b0 \ --classes Normal,Benign,InSitu,Invasive \ --output_dir ./outputs \ --level 0 \ --tile_size 256 \ --stride 128 \ --img_size 256 \ --batch_size 64 \ --tissue_thr 0.1 \ --seg_thr 0.70 \ --seg_agg p95 \ --cls_thr 0.30