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Additional file 1: of Guide for library design and bias correction for large-scale transcriptome studies using highly multiplexed RNAseq methods

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https://figshare.com/articles/dataset/Additional_file_1_of_Guide_for_library_design_and_bias_correction_for_large-scale_transcriptome_studies_using_highly_multiplexed_RNAseq_methods/9600224
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Sample script. This script demonstrates the library bias correction by NBGLM-LBC, performs the simulation experiments for Fig. 3, and draws Figs. 1b, 2a, c and 3 bottoms. Before running this script using R, LBC-additionalFile2.txt (Additional file 2) and LBC-additionalFile3.txt (Additional file 3) must be placed within the working directory, and the preprocessCore, DESeq2 and factoextra packages must be installed. (R 10 kb)
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2019-08-13
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