data for Amplicon analysis
收藏Figshare2024-03-08 更新2026-04-08 收录
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https://figshare.com/articles/dataset/data_for_Amplicon_analysis/25370296/1
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资源简介:
here contains all the primary data used in Amplicon analysis.*<b>group.txt </b>: sample infos.<b>radio_only_gut*</b> are for radio only mouse gut experiment group<b>radio_only_feces*</b> are for radio only mouse feces experiment group<b>radio_and_raffinose* </b>are for radio and raffinose mouse feces experiment group<b>*asv_seq.fasta</b>: ASV sequence from QIIME2 DADA2 workflow*<b>rarefied_asv*</b>: rarefied ASV count profiles*<b>taxonomy.tsv</b>: silva 138 taxonomy annotation * <b>taxon_genus_profile.tsv: </b>taxon profiles at genus level*<b>picrust2_pred_metagenome_unstrat.tsv : </b> original output from picrust2*<b>pathway_abus.tsv</b>: pathway profiles inferred by ggpicrust2<b>g__Bacteroides.fasta</b> : sequence for construct phylogenetic tree of genus Bacteroides.<b>g__Bacteroides.infos.tsv</b> : sequence infomations of Bacteroides in<b> </b><b>g__Bacteroides.fasta</b><b>g__Bacteroides.tree: </b>the<b> </b>constructed phylogenetic tree
提供机构:
xie, shichang
创建时间:
2024-03-08



