Gene Candidate Prioritizations In Genetic Diseases With GLOWgenes (www.glowgenes.org)
收藏figshare.com2023-06-12 更新2025-03-22 收录
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https://figshare.com/articles/dataset/Gene_Candidate_Prioritizations_In_Genetic_Diseases_With_GLOWgenes_zip/21770501/2
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资源简介:
Every directory contains the output of GLOWgenes for a disease.
- The disease name is in the directory name itself
- The gene panels for every disease were downloaded from https://panelapp.genomicsengland.co.uk/panels/
- GLOWgenes was run using as input the gene panel provided by PanelApp
- GLOWgenes results:
- GLOWgenes_prioritization_Random.txt is the file with the genes ranked based on their association to the gene panel, prioritization goes from 1 to the largest number
- Files like GLOWgenes_NetworkName_KnowledgeCategory.txt (e.g. GLOWgenes_Reactome_PATHWAYS.txt) contaisn prioritizations for every network
If you use GLOWgenes prioritization, please cite us: https://www.medrxiv.org/content/10.1101/2022.10.07.22280759v2.full
每个目录均包含针对特定疾病的 GLOWgenes 输出结果。
- 疾病名称直接体现在目录名称中
- 各疾病对应的基因阵列均从 https://panelapp.genomicsengland.co.uk/panels/ 下载获得
- GLOWgenes 的运行以 PanelApp 提供的基因阵列作为输入
- GLOWgenes 结果如下:
- GLOWgenes_prioritization_Random.txt 文件包含根据基因阵列关联度排序的基因列表,排序顺序从 1 至最大数值
- 类似于 GLOWgenes_NetworkName_KnowledgeCategory.txt(例如:GLOWgenes_Reactome_PATHWAYS.txt)的文件,包含每个网络的优先级排序
若使用 GLOWgenes 优先级排序,请引用我们:https://www.medrxiv.org/content/10.1101/2022.10.07.22280759v2.full
提供机构:
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