Predicted prophage like regions in bacterial genomes

This file contains all the predictions about prophages, whether or not they were finally used.
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This file is 447M and contains the following information in a tab separated text file:
0. GENOMEID - Genbank genome assembly accession
1. Contig - Contig ID in the genome assembly
2. Start - prophage start position
3. Stop - prophage end position
4. Length - length of the prophage ((end-start)+1)
5. #CDS - number of coding sequences in the prophage
6. Decision - Whether the prophage is predicted or kept. See below.
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The decision field has three options: Too short (&lt;5 genes), no genes with homology to any known phage gene, or Kept. The latter means that phispy believes that it is a prophage region.
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