File S1 - Association Mapping for Important Agronomic Traits in Core Collection of Rice (<i>Oryza sativa</i> L.) with SSR Markers

Table S1, Accessions, variety names, origin, germplasm types of 150 rice varieties in Panel 1. Table S2, Summary statistics of the 274 SSR markers used in this study. Table S3, Allele frequency of the 55 significant markers in three panels. Figure S1, Frequency distribution of heading days, plant height, seed set rate and panicle length in Panel 1 in 2008. The height of black bar represents the number of varieties in different range of traits. Figure S2, Frequency distribution of grain length, grain width, grain length/width and 1000 grain weight in Panel 1 in 2008. The height of black bar represents the number of varieties in different range of traits. Figure S3, Frequency distribution of flag leaf length, flag leaf width, flag leaf length/width and panicle number per plant in Panel 1 in 2008. The height of black bar represents the number of varieties in different range of traits. Figure S4, Frequency distribution of heading days, plant height, seed set rate and panicle length in Panel 1 in 2009. The height of black bar represents the number of varieties in different range of traits. Figure S5, Frequency distribution of grain length, grain width, grain length/width and 1000 grain weight in Panel 1 in 2009. The height of black bar represents the number of varieties in different range of traits. Figure S6, Frequency distribution of flag leaf length, flag leaf width, flag leaf length/width and panicle number per plant in Panel 1 in 2009. The height of black bar represents the number of varieties in different range of traits. Figure S7, Distribution of pairwise relative kinship values in Panel 2 and 3. The height of black bar represents the percentage of varieties in different range of kinships. Figure S8, Delta K change according to different K among Panel 2 and Panel 3 identified by STRUCTURE under Admixture model. (DOC)