Summary Statistics from "Genetically regulated gene expression and proteins revealed discordant effects" (LWAS of biomarker)
收藏资源简介:
Summary statistics of 92 blood protein levels. The corresponding publication is currently under revision. The zipped txt file is tab-delimited and contains the following columns: protein: protein name abbreviation cytoband: genomic region gene: gene name abbreviation setting: either "combined" (adj. for sex & age) or sex-stratified ("males", "females"; adj. for age) variant_id_hg19: SNP ID according to hg19 variant_id_hg38: SNP ID according to hg19 chr: chromosome pos_hg19: base position according to hg19 pos_hg38: base position according to hg19 effect_allele: also known as counted allele in additive model other_allele: not-counted allele eaf: effect allele frequency maf: minor allele frequency info: imputation info score n_samples: number of samples beta: effect estimate se: standard error zscore: Z-statistic pvalue: p-value FDR: FDR by gene and setting BBFDR: hierarchical FDR by setting hierFDR: TRUE if SNP is significant after hierarchical FDR



