Details of the hits in the top canonical pathway (iCOS-iCOSL Signaling in T Helper Cells).

*found only by RIP-Seq
†found by both RNA-Seq and RIP-Seq
Official symbols of the significant genes found via RNA-Seq (RIP-Seq) that are in the pathway (Fig 2) is given along with name of its corresponding node in the pathway. Fold is given as KO/CTL (RNA-Seq) or IP/CTL (RIP-Seq), and q is the false discovery rate value based on method of Benjamini-Hochberg. Genes were identified by both RNA-Seq and RIP-Seq. Numbers in parentheses and italicized denote data obtained from RIP-Seq.