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De Novo Transcriptome Assembly of PAE

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NIAID Data Ecosystem2026-05-02 收录
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Data Description for Pilose Antler Protein Extract (PAE) De Novo Transcriptome AssemblyThe dataset provided in this study consists of high-throughput RNA sequencing (RNA-Seq) data derived from Pilose Antler Protein Extract (PAE). The purpose of this data is to perform a de novo transcriptome assembly, which is essential for understanding gene expression and functional annotation in the absence of a reference genome.Key Features of the Dataset:Organism: Pilose Antler Protein Extract (PAE)Sequencing Technology: Illumina platformData Type: RNA-SeqData Format:Raw Data: FASTQ files containing raw sequencing reads.Expression Data: FPKM (Fragments Per Kilobase of transcript per Million mapped reads) files for gene expression levels.Files Included:PACE_lower_1.fq: Raw sequencing reads from the lower sample (first part).PACE_lower_2.fq: Raw sequencing reads from the lower sample (second part).PACE_upper_1.fq: Raw sequencing reads from the upper sample (first part).PACE_upper_2.fq: Raw sequencing reads from the upper sample (second part).PACE_lower.gene.fpkm: Gene expression levels for the lower sample in FPKM format.PACE_upper.gene.fpkm: Gene expression levels for the upper sample in FPKM format.

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2024-06-07
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