Seroplacer Environmental Sample and Isolate Sequencing

Test 16S sequence data for Seroplacer R package analysis. These are the FASTQ files for both the environmental samples and the Salmonella isolates. Sequencing was performed using Loop Genomics 16S amplicon sequencing pipeline. The goal of this study is to analyze if it is possible to predict bacterial serovars using only 16S amplicon sequencing data. We used these test isolates and environmental samples in order to evaluate the performance of our computational algorithm.