Performance comparison between the meiosis-specific network and iMM904 in predicting sporulation-deficient genes using hypergeometric P-values.
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https://figshare.com/articles/dataset/_Performance_comparison_between_the_meiosis_specific_network_and_iMM904_in_predicting_sporulation_deficient_genes_using_hypergeometric_P_values_/700000
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&The Pearson correlation between in silico fluxes and biochemical values on eight pathways is calculated for each gene KO and WT. A z-score is computed to measure the difference in correlation coefficient between a KO and WT. A KO with z-score≤−2 for at least one time point is predicted to be a sporulation-deficient gene.
*The optimal objective value is obtained for each gene KO and WT. A z-score is computed to measure the difference in optimal objective value between a KO and WT. A KO with z-score≤−2 for at least one time point is predicted to be a sporulation-deficient gene.
#The total flux difference between a gene KO and WT is obtained from linear MOMA. A KO with flux difference≥1000 for at least one time point is predicted to be a sporulation-deficient gene.
创建时间:
2013-05-08



