Phylograms and dataset used for the identification of genome sequenced strains published in the journals Genome Announcements and Microbiology Resource Announcement.
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Dataset and phylograms. Suppl. Table 1. Overview of genome sequenced Eurotiales published in Genome Announcements and Microbiology Resource Announcements (until February 2021).Suppl. Dataset 1. Partial calmodulin sequence alignment used for the construction of Suppl. Fig. 1 (Aspergillus).Suppl. Dataset 2. Partial beta-tubulin sequence alignment used for the construction of Suppl. Fig. 2 (Penicillium).Suppl. Dataset 3. Partial beta-tubulin sequence alignment used for the construction of Suppl. Fig. 3 (other Eurotiales, e.g. Monascus, Paecilomyces).Suppl. Treefile 1. Treefile generated by RAxML based on the analysis of partial calmodulin gene sequences (see Suppl. Dataset 1) and used for the preparation of Suppl. Fig. 1 (phylogeny Aspergillus).Suppl. Treefile 2. Treefile generated by RAxML based on the analysis of partial beta-tubulin gene sequences (see Suppl. Dataset 2) and used for the preparation of Suppl. Fig. 2 (phylogeny Penicillium).Suppl. Treefile 3. Treefile generated by RAxML based on the analysis of partial beta-tubulin gene sequences (see Suppl. Dataset 3) and used for the preparation of Suppl. Fig. 3 (phylogeny misc. genera).Suppl. Fig. 1. Phylogram based on partial calmodulin (CaM) gene sequences used for the identification of genome sequenced Aspergillus species published in the journals Genome Announcements and Microbiology Resource Announcements. Only misidentified genome sequenced strains are included and highlighted in red; the other strains are from the reference dataset described in Houbraken et al. (2020)[Studies in Mycology 95: 5–169]. The bootstrap percentages of the maximum likelihood (ML, RAxML) analysis are presented at the nodes; values less than 70 % bootstrap support are not shown.Suppl. Fig. 2. Phylogram based on partial beta-tubulin (BenA) gene sequences used for the identification of genome sequenced Penicillium species published in the journals Genome Announcements and Microbiology Resource Announcements. Only misidentified genome sequenced strains are included and highlighted in red; the other strains are from the reference dataset described in Houbraken et al. (2020)[Studies in Mycology 95: 5–169]. The bootstrap percentages of the maximum likelihood (ML, RAxML) analysis are presented at the nodes; values less than 70 % bootstrap support are not shown.Suppl. Fig. 3. Phylogram based on partial beta-tubulin (BenA) gene sequences (see Suppl. Dataset 3) used for the identification of genome sequenced Eurotiales (other than Aspergillus and Penicillium) species published in the journals Genome Announcements and Microbiology Resource Announcements. Only misidentified genome sequenced strains are included and highlighted in red; the other strains are from the reference dataset described in Houbraken et al. (2020)[Studies in Mycology 95: 5–169]. The bootstrap percentages of the maximum likelihood (ML, RAxML) analysis are presented at the nodes; values less than 70 % bootstrap support are not shown.
创建时间:
2020-09-22



