Somatic mutations alter the differentiation outcomes of iPSC-derived neurons (Metadata and AnnData/H5AD files)

Data S1: Metadata information for the 828,937 processed cells from the DN dataset: donor identity, cell type annotation, pool identifier, 10x sample, time point and replicate information. Related to STAR Methods: Reanalysis of pooled single-cell data (DA). Data S2-S4: AnnData/H5AD files containing the single-cell gene expression matrices and the metadata for day 11, day 30 and day 52, respectively. The gene expression is normalised and log-transformed, but not scaled. md5 files are also included. Related to STAR Methods: DE analysis between failed and successful lines. #File names: File-Data S1: suppData1.RDS File-Data S2: allpools.scanpy.D11.wMetaClustUmapGraph.exprLogNormNotScaled_notKO.h5ad File-Data S3: allpools.scanpy.D30.wMetaClustUmapGraph.exprLogNormNotScaled_notKO.h5ad File-Data S4: allpools.scanpy.D52.wMetaClustUmapGraph.exprLogNormNotScaled_notKO.h5ad