Genes with resting and stimulated eQTLs.

As in Table 1, for each row we list a SNP and the gene transcript for which it is a cis-eQTL. For each SNP we indicate the fold change in expression conferred per allele, assuming an additive model and the false discovery rate estimate. Finally, we indicate whether the effect is specific for CD4+ effector memory T cells [8].
* denotes identical SNPs.
** In cases where the lead resting and stimulated SNPs differ, pΔ compares the cross-state effect sizes of only one SNP. For each gene, the SNP with the stronger association across the two states was considered.