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Endogenous shRNAs, siRNAs, and Other Microprocessor-independent, Dicer-dependent Small RNAs in Mouse ES Cells

ChEBI2008-09-09 更新2026-07-21 收录

非编码RNA分析

干细胞基因调控

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-12521 数据链接链接失效反馈

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资源简介：

Endogenous shRNAs, siRNAs, and Other Microprocessor-independent, Dicer-dependent Small RNAs in Mouse ES Cells

应用场景：

创建时间：

2008-09-09

RNA二级结构预测

非编码RNA分析

Native structure is here taken as the Rfam consensus structure from the seed alignments of these elements of HCV and HIV. Two measures are given. The average distance represents the average base pair

NIAID Data Ecosystem60

Gene expression changes in human cord blood-derived hematopoietic stem and progenitor cells upon Centrifugation enhanced Nanostraw Transfection or Conventional Electroporation. Gene expression changes in human cord blood-derived hematopoietic stem and progenitor cells upon Centrifugation enhanced Nanostraw Transfection or Conventional Electroporation

基因组学技术评估

干细胞基因调控

CD34+ human cord blood-derived cells were subjected to GFP mRNA delivery or mock treatment using Centrifugation enhanced Nanostraw Transfection (CeNT) or conventional electroporation. Overall design:

NIAID Data Ecosystem50

Sphingopyxis sp. Kp5.2

tRNA基因组

非编码RNA分析

tRNAs decoding standard 20 AA 46 Selenocysteine tRNAs (TCA) 0 Possible suppressor tRNAs (CTA,TTA,TCA) 0 tRNAs with undetermined or unknown isotypes 0 Predicted pseudogenes 4 Total tRNAs 50

Genomic tRNA Database40

Examples of genes with DM and DE in OESC versus CESC.

差异甲基化与差异表达

干细胞基因调控

Examples of genes with DM and DE in OESC versus CESC.

NIAID Data Ecosystem50

Transcriptomes of miR-290-295 KO mESCs treated with siPOOLs against the transcription factor Tfap4

干细胞基因调控

miRNA靶标识别

In order to identify direct microRNA targets in mouse embryonic stem cells (mESCs), we knocked out microRNA effector genes, profiled their transcriptomes and integrated the data with additional publis

NIAID Data Ecosystem40

Endogenous shRNAs, siRNAs, and Other Microprocessor-independent, Dicer-dependent Small RNAs in Mouse ES Cells

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