List of 239 single nucleotide polymorphisms exclusively shared between strains HBJ4-3, HBJ6-1 and HBJ6-3.

Chr-Position, position of SNPs on the indicated chromosome (Ca22chrx, where x designates chromosome number, followed by position of SNP on the corresponding chromosome) according to the C. albicans genome Assembly 22, version A22-s07-m01-r57; ORF name, systematic nomenclature of ORF, including intron or exon region, where are located differential SNPs (haplotypes A and B) in strains HBJ4-3, HBJ6-1 and HBJ6-3 relative to those present in the remaining 15 CF02 isolates; Gene name, name of the gene corresponding to ORF/intron/exon where the SNPs are located; Location of SNP, location of SNP in the genome, either in intergenic/repeat or ORF/exon/intron regions; Polymorphism, nature of differential polymorphism in strains HBJ4-3, HBJ6-1 and HBJ6-3 relative to those present in the remaining 15 CF02 isolates; SC5314, polymorphic nucleotide in haplotypes A and B of the reference genome; HBJ1 to HBJ8-4, SNPs (haplotypes A and B) relative to polymorphic nucleotide from strain SC5314 are listed for each of the 18 serially recovered clinical isolates from patient CF02. (XLSX)