Discordance measures Δr (read-weighted), Eq (2)) and Δu (unweighted), Eq (3)) for eukaryotic samples. For all samples S the same false discovery rate threshold of 0.05 was used to define discordance.
The repository is part of a cartloader public tutorial (https://seqscope.github.io/cartloader/vignettes/subregion_tutorials/merscope/) based on the Vizgen MERSCOPE mouse datase. It showcases how to us
A total of 12 markers in the TLR region and 5 markers in the NADSYN1 region achieved a nominal P-value of 0.0001 or lower (data not shown). We list with an asterisk one additional marker whose differe
