Data and code for: Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5

This dataset contains data and code underlying the comparative genomics, amplicon sequencing, and statistical analysis of the research article "Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5”. Genome sequences and short read datasets are available under NCBI Bioproject accession PRJNA392822. The dataset contains tar-balls for the main workflows of the analysis. Dowload and unpack to view the contents (tar -zxvf filename.tar.gz). For each tar-ball, a README.txt file describes the contents of the directory. The analyses require certain open-source software packages to be installed. These are not provided here.