Data and code associated with the manuscript "Short tandem repeats delineate gene bodies across eukaryotes" (Reinar et al.)

The "Rev_Pipeline_and_Figures" Jupyter Notebook contains code required to reproduce results and figures in the manuscript including the repetitiveness function run on simulated data to report repetitiveness of A and AT motifs.The repository also includes theTimeTree phylogenetic tree for 891 species (.nwk, "SourceData.Figure1d_2")Relative positions of ULTRA monomer and dimer STRs, and lengths of intergenic sequences (.hdf5, "SourceData.Figure2a_2")Complete repetitiveness analysis with metadata (.tsv, "SourceData.Figure4-5")Transcription factor binding site analyses (.tsv, "SourceData.Figure7e_2")List of housekeeping functions (.txt, "SourceData.Figure7c_2")GO analysis (.tsv, "SourceData.Figure7c_3")The remaining Source Data can be found with the paper.