TPS genome blast
收藏DataCite Commons2021-05-17 更新2024-07-28 收录
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https://figshare.com/articles/dataset/TPS_genome_blast/14343347/1
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The selected TPSs genes were blasted against the NCBI, UNIPROT databases, and the 11 genomes of Solanaceae, using a threshold value of 1E-5. All TPSs were downloaded from Viridiplantae followed by a protein-protein blast; hits above 80% of similarity and 70% of cover were saved for further analyses. Meta-alignments of protein sequences were performed using T-coffee (Wallace et al. 2006), MUSCLE v3.8 (Edgar 2004) and MAFF v6. (Katoh 2005).
提供机构:
figshare
创建时间:
2021-05-12



