five

SPTT & Trace-SPTT dataset

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DataCite Commons2025-03-28 更新2025-05-07 收录
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https://figshare.com/articles/dataset/SPTT_Trace-SPTT_dataset/27923973/2
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<b>Dataset Overview</b><br>This dataset has been generated using our SPTT and SPTEdu-seq techniques. Below are the details for each file included:FilesTo optimize storage, all datasets are compressed into tar.gz format. Please extract the files after downloading.<b>MOB.tar.gz</b><b>Profiled by:</b> SPTT<b>Contents:</b>Digital expression data (in sparse matrix <code>.mtx</code> format)Metadata including:Spatial barcodesSpatial coordinatesSeurat clusters(and cell type annotations)Other essential information<b>MouseBrain.tar.gz</b><b>Profiled by:</b> SPTT<b>Contents:</b>Digital expression data (in sparse matrix <code>.mtx</code> format)Metadata including:Spatial barcodesSpatial coordinatesSeurat clusters(and cell type annotations)Other essential information<b>IS_MOB.tar.gz</b><b>Profiled by:</b> SPTEdu-seq<b>Contents:</b>Digital expression data (in sparse matrix <code>.mtx</code> format)Metadata including:Spatial barcodesSpatial coordinatesSeurat clustersDesignations of barcodes as either <i>hippocampus region</i> or <i>cortex region</i> for cell type deconvolution and RNA velocity assays<br><br><b>IS_uninjured.tar.gz</b>, <b>IS_3dpi.tar.gz</b>, <b>IS_7dpi.tar.gz</b>, and <b>IS_14dpi.tar.gz</b><b>Profiled by:</b> SPTEdu-seq<b>Contents:</b>Digital expression data (in sparse matrix <code>.mtx</code> format)Metadata including:Spatial barcodesSpatial coordinatesUTI profiling numbersSeurat clustersDesignations of barcodes as <i>injury regions</i> (based on unsupervised clustering and spatial coordinates)<br>
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figshare
创建时间:
2025-03-05
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