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Gene Regulatory Basal Network of TCGA-STAD

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https://www.ndexbio.org/viewer/networks/1dabd135-8bab-11eb-9e72-0ac135e8bacf
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This network was generated from TCGA RNA-seq data for stomach adenocarcinoma (STAD) using Bayesian network estimation [1,2]. The subtype-specific edges we identified from the edge contribution value (ECv) [2] were highlighted in this estimated basal network with different colors (black: subtype1, magenta: subtype2, green: subtype3). These subtypes were identified with our proposed method (the paper is submitting) and showed significant differences in their prognosis, which did not show by some existing methods.
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2021-09-26
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