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AlphaPept Benchmark Dataset

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https://zenodo.org/record/10223453
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This is accompanying data for the benchmark of the AlphaPept software https://www.biorxiv.org/content/10.1101/2021.07.23.453379v1 Files starting with PXD028735: These are the output files and logs from Figure 7: Benchmarking AlphaPept on Thermo and Bruker mixed species datasets. Raw data was taken from PXD028735. SLURM: Code and logs for running on SLURM cluster for the 200 HeLa proteome test, see Supplementary Table 1 AWS_test: Timings when running on large AWS instances, see Supplementary Table 1
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2024-02-02
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