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Transcriptome characterization of the Olympia oyster and pinto abalone

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Figshare2016-01-18 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Transcriptome_characterization_of_the_Olympia_oyster_and_pinto_abalone/156431/1
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Transcriptome information for the Olympia oyster and pinto abalone. Data S1. <em>Ostrea lurida</em> transcriptome. Assembled contigs of <em>O. lurida</em> transcriptome sequencing. Data S2. <em>Haliotis kamtschatkana</em> transcriptome. Assembled contigs of <em>H. kamtschatkana</em> sequencing. Data S3. <em>Ostrea lurida</em> SPIDs. BLASTx results for <em>O. lurida</em> contig search against the UniProtKB/Swiss-Prot database. BLAST e-values and gene descriptions are also given. Data S4. <em>Ostrea lurida</em> GO. Gene Ontology annotations of <em>O. lurida</em> contigs. GO annotations are made based on associations with a Swiss-Prot ID. Data S5. <em>Haliotis kamtschatkana</em> SPIDs. BLASTx results for <em>H. kamtschatkana</em> contig search against the UniProtKB/Swiss-Prot database. BLAST e-values and gene descriptions are also given. Data S6. <em>Haliotis kamtschatkana</em> GO. Gene Ontology annotations of <em>H. kamtschatkana</em> contigs. GO annotations are made based on associations with a Swiss-Prot ID. Data S7.<em> Ostrea lurida</em> bitscores. Bit scores for BLASTn results of <em>O. lurida contigs</em> against species-specific databases of other closely related species. Data S8. <em>Haliotis kamtschatkana</em> bitscores. Bit scores for BLASTn results of <em>H. kamtschatkana</em> contigs against species-specific databases of other closely related species. Data S9. <em>Ostrea lurida</em> SNPs. SNP information for putative SNPs identified in the <em>O. lurida</em> transcriptome. Contig numbers are listed in the leftmost column, followed by SNP location and allele. Annotations of the contigs, as determined through a BLASTx against the UniProtKB/Swiss-Prot database, are given along with the e-value for the BLAST result. Data S10. <em>Haliotis kamtschatkana</em> SNPs. SNP information for putative SNPs identified in the <em>H. kamtschatkana</em> transcriptome. Contig numbers are listed in the leftmost column, followed by SNP location and allele. Annotations of the contigs, as determined through a BLASTx against the UniProtKB/Swiss-Prot database, are given along with the e-value for the BLAST result.
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2013-02-11
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