Candidatus Endomicrobium Deltotrichonymphae phylotype MdDo-005. Candidatus Endomicrobium sp. MdDo-005

The termites Mastotermes darwiniensis was collected in Darwin, Australia. Worker termites reared with cellulose powder for three days were subjected to the experiments. The host Deltotrichonympha operculata cell was ruptured in buffer and MdDo-005 cells which leaked out were collected with a glass capillary. These collected cells were directly subjected to isothermal whole genome amplification. After checking their purity by clone analysis of 16S rRNA gene, the complete genome sequence was determined using a illumina Miseq system and ABI 3730 capillary sequencers.