Protein-centric rate of sequence evolution according to Rate4Site on orthogroups of 14 fungal species
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Overall, 25 descriptors (features) are calculated for 3797 unique proteins.The legend for each descriptor is given in the associated header file.Columns 1-5 provide protein identifiers:- ORF, - SGD Gene Name, - UniprotKB, - Matching PDB structure?- PDB code of closest structureColumns 6-8 correspond to protein expression:- Integrated abundance in ppm,- log10 abundance,- bins of abundance (5 bins)Columns 9-16 contain evolutionary rates averaged over:- Full sequence- Disordered residues- Not Disordered residues- Domain residues- Not Domain residues- Residues with PDB coordinates- Surface residues (>25% relative ASA)- Buried residues (Column 17 indicates whether both domains and disordered regions coexist (at least 20 residues for each)Column 18-25 give the number of residues within each region considered for the average of evolutionary rates in column 9-16.
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2021-02-08



