Additional file 6: of Application of high-throughput amplicon sequencing-based SSR genotyping in genetic background screening

Table S5 Valid and comparable SSRs in DXT and DXB. The valid SSR loci in each sample are those SSR loci covered by at least 10 reads and with stutter ratios lower than 0.5. Comparable SSRs between two samples are those SSR loci that are valid in both samples. The genotype is the major genotype of the SSR locus, represented as the repeat unit with the repeat number, e.g., CGC4. The coverage represents the number of reads that support the genotype. The stutter ratio represents the ratio of the read numbers of the minor and major genotypes. (XLSX 37 kb)