Phylogenomic analyses of sclerophyllous oaks from southwest China

LIST(1) Concatenated CDS regions for chloroplast phylogenomic analysis.(2) Concatenated non-coding regions for chloroplast phylogenomic analysis.(3) The vcf file (53samples) allowed 15% missing genotypes across all individuals (max-missing = 0.85) and used Q. dolicholepis as the outgroup.(4) The vcf file (55samples) allowed 15% missing genotypes across all individuals, including two more distant outgroup species: Castanea mollissima and Q. mongolica.