five

MM and QMMM trayectories from "Conformational Changes and ATP Hydrolysis in Zika Helicase. The Molecular Basis of a Biomolecular Motor Unveiled by Multiscale Simulations"

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https://zenodo.org/record/8386973
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资源简介:
Here are provided two trayectories from the results of "Conformational Changes and ATP Hydrolysis in Zika Helicase. The Molecular Basis of a Biomolecular Motor Unveiled by Multiscale Simulations". ZikaNS3h-MMtrajectory.nc contains a Molecular Mechanics MD simulation of the system with ATP bound to the active site. TS1-mech1-QMMMtrajectory.nc contains a QMMM MD simulation of the system with TS1 of the base-assisted mechanism bound to the active site. ZikaNS3h.prmtop is the parameter file.
创建时间:
2023-09-29
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