遇见数据集

Protein structure model predictions for secreted fungal proteins

收藏
Zenodo2023-06-08 更新2026-05-25 收录
数据链接:
官方服务:

资源简介:

<strong>Dataset A - Alphafold2 prediction output data for 753 secreted proteins of <em>Rhizophagus irregularis </em>DAOM197198</strong>. Gene IDs are taken from the annotation by Yildirir et al. 2021, doi.org/10.1111/nph.17842 <strong>Dataset B - Alphafold2 prediction output data for 10 fungal effectors.</strong><strong> </strong>These are nine effectors from <em>Fusarium oxysporum</em> f. sp.<em> lycopersici</em> and RiSLM from <em>Rhizophagus irregularis</em> as well as their amino acid sequences. Signal peptides and sequences preceding a predicted Kex2 processing site were removed. <strong>Dataset C - Alphafold2 prediction output data for 454 matches of a MycFOLD-HMM search</strong> across the Mycocosm genome database (https://mycocosm.jgi.doe.gov/mycocosm/home) and 36 Glomeromycotina fungal genomes.

提供机构:
Zenodo
创建时间:
2022-12-15
二维码
社区交流群
二维码
科研交流群
商业服务