Additional file 2 of Elucidation of the genetic determination of clutch traits in Chinese local chickens of the Laiwu Black breed

Additional file 2: Table S1. The clean data details of resequencing samples. Table S2. Mapping details of resequencing samples. Table S3. Distribution of SNPs after LD pruned. Table S4. Estimates of genetic correlations between clutch traits g using the relationship matrix that blends genomic information. Table S5. GWAS significant SNPs. Table S6. Annotations of GWAS significant SNPs. Table S7. The relationship between SNP genotypes with phenotypes. Table S8. The results of KEGG analysis. Table S9. The results of GO analysis.