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Aging gut microbiota of wild macaques are equally diverse, less stable but progressively personalized_Sadoughi_Datasets, R codes, and outsourced R functions

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DataCite Commons2022-05-09 更新2024-07-29 收录
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https://figshare.com/articles/dataset/Aging_gut_microbiota_of_wild_macaques_are_equally_diverse_less_stable_but_progressively_personalized_Sadoughi_Datasets_R_codes_and_outsourced_R_functions/19071182
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<strong>DATASETS</strong> The original ASVs tables (asv_table and asv_table_filtered) and metadata file (metadata_samples) are provided with the phylogenetic tree (rooted_tree) and DNA sequences (sequenes_100). <br> Datasets holding other complex metadata used for analyses or plotting are also provided (daily_availability_indices; dyadic_sociality_data; sociality_data). <br> To reduce computation time, several datasets generated during the study, using the R code provided, were exported and are readily available (alpha_diversity; alpha_diversity_normalized; master_frame; personalization_data). <br> <strong>R CODES</strong> R scripts numbered according to the corresponding Results sections of the article.<br> <strong>OUTSOURCED R FUNCTIONS</strong> R codes of several statistical functions loaded in the main R codes used to perform analyzes and generate figures. To load the outsourced R functions, specify the pathways to the outsourced R codes or place all R scripts in the same location.
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figshare
创建时间:
2022-05-09
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