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Demographic and spatially-explicit landscape genomic analyses in a tropical oak reveal the impacts of late Quaternary climate change on Andean montane forests

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figshare.com2023-02-22 更新2025-03-26 收录
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https://figshare.com/articles/dataset/Demographic_and_spatially-explicit_landscape_genomic_analyses_in_a_tropical_oak_reveal_the_impacts_of_late_Quaternary_climate_change_on_Andean_montane_forests/21936888/1
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资源简介:
Samples.xlsx: Description of individual and population codes used in the different analyses and genomic datasets. p7r08m5minMAF001.str: Input file used to perform genetic clustering (STRUCTURE) and principal component (PCA) analyses. p7r08m5minMAF001.arp: Input file used to perform ARLEQUIN analyses. Occurrence.csv: Occurrence data used for environmental niche modelling (ENM). FASTSIMCOAL2.zip: This ZIP folder contains input files for the four models of population divergence run in FASTSIMCOAL2. STAIRWAYPLOT.zip: This ZIP folder contains input files for demographic reconstructions in STAIRWAY PLOT. SPLATCHE2.zip: This ZIP folder contains input files for the three spatially-explicit demographic models run using SPLATCHE2.

Samples.xlsx:对各类分析和基因组数据集中个体及种群编码的描述。 p7r08m5minMAF001.str:用于执行遗传聚类(STRUCTURE)和主成分分析(PCA)的输入文件。 p7r08m5minMAF001.arp:用于执行ARLEQUIN分析的输入文件。 Occurrence.csv:用于环境生态位建模(ENM)的出勤数据。 FASTSIMCOAL2.zip:此ZIP文件夹包含在FASTSIMCOAL2中运行的四种种群分化模型的输入文件。 STAIRWAYPLOT.zip:此ZIP文件夹包含用于STAIRWAY PLOT人口结构重建的输入文件。 SPLATCHE2.zip:此ZIP文件夹包含使用SPLATCHE2运行的三个空间特定人口结构模型的输入文件。
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