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An Integrated Approach to Reconstructing Genome-scale Transcriptional Regulatory Networks

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https://figshare.com/articles/dataset/An_Integrated_Approach_to_Reconstructing_Genome_scale_Transcriptional_Regulatory_Networks/1249869
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This publication contains the code and sample datasets to run the workflow described in "An Integrated Approach to Reconstructing Genome-scale Transcriptional Regulatory Networks" by Saheed Imam, Daniel R. Noguera and Timothy J. Donohue (Plos Comp bio). The workflow enables the reconstruction of TRNs using comparative genomics and gene expression analyses. The files provided here include example data for E. coli to facilitate the use of the workflow for any organsim of interest. See http://dx.doi.org/10.6084/m9.figshare.1279163 for the code without the E. coli dataset included and for future updates.
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2014-12-25
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