AllanLab fluidigm pipeline test dataset

The Allan Lab has published a Fluidigm pipeline online. This is the url: https://github.com/HPCBio/allan-fluidigm-pipeline. This url includes a tutorial for running the pipeline. However it does not have test datasets yet. This tarball hosted at the Illinois Data Bank is the dataset that completes the github tutorial. It includes inputs (custom database of tick pathogens and fluidigm raw reads) and output files (tables of samples with taxonomic classifications).

Allan 实验室已在线发布了一项 Fluidigm 工作流程。该工作流程的网址为：https://github.com/HPCBio/allan-fluidigm-pipeline。该网址包含了运行此工作流程的教程。然而，目前尚无测试数据集。在伊利诺伊州数据银行托管的一个 tarball 包含了完整 GitHub 教程所需的数据集。该数据集包含输入数据（针对蜱虫病原体的定制数据库和 Fluidigm 原始读取数据）以及输出文件（包含样本分类学分类的表格）。